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BD Cellismo™ Data Visualization Tool是一款用于单细胞多组学数据的二次分析及可视化的软件工具。研究人员无需编程即可实现百万级数据点的系统分析。
通过BD Cellismo™ Data Visualization Tool,您可以轻松基于多种参数对样本数据进行可视化分析;根据基因表达谱进行细胞亚群划分;生成直方图、热图、点图、火山图、小提琴图、tSNE图和UMAP图;自定义图表并导出为.PNG或.SVG文件,便于科研协作与成果发表。
观看视频,了解如何使用 BD Rhapsody™ 序列分析 Pipeline, 进行初步分析,并结合BD Cellismo™ Data Visualization Tool进行二次分析。
- Chapters
- descriptions off, selected
- subtitles settings, opens subtitles settings dialog
- subtitles off, selected
- en (Main), selected
This is a modal window.
Beginning of dialog window. Escape will cancel and close the window.
End of dialog window.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
功能特点
-
直观易用: 点击即可将数据可视化,一键生成专业图表
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用户友好: 无需编程基础,轻松上手
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多组学支持:轻松探索单细胞RNA和蛋白质数据集。
无需编写任何代码或编程,即可使用BD Cellismo™ Data Visualization Tool生成与Seurat相同的数据可视化结果
使用BD Cellismo™ Data Visualization Tool(右),您无需编写任何代码,即可生成与Seurat(左)相同的数据可视化结果。BD Cellismo™ Data Visualization Tool操作界面直观,让您通过点击操作,轻松自定义图表参数(例如,点大小、颜色、不透明度)。

输入要求:
- (首选)来自 BD Rhapsody™序列分析 Pipeline. 的.Cellismo输出文件。该文件包含所有模态(RNA和AbSeq)的表达数据,以及由管道生成的细胞注释信息(如样本复用标签、免疫细胞类型)。
- 支持的其他输入格式:
- Matrix Exchange(MEX)
- H5MU/H5AD

版本说明
最新版本:v1.0 | 发布日期:2025年3月
初始版本包括以下功能:
- 支持加载多种格式的单细胞多组学数据,包括带有捆绑元数据的BD Rhapsody™序列分析管道.Cellismo文件、matrix market(MEX)、Scanpy/Muon或H5MU/H5AD
- 同时管理多个单细胞项目,点击即可快速切换
- 可视化质量控制,直观显示被剔除的细胞
- 支持生成7种不同类型的图表:降维散点图、双轴图、生物产物相关性图、热图、点图、直方图和小提琴图。
- 提供丰富的图表自定义样式选项
- 可将图像保存至项目图库侧边栏,并可轻松调用
- 可将图库中的图像从侧边栏拖拽至外部应用程序
- 通过圈选感兴趣细胞、运行Leiden或K-means聚类,或合并现有注释来创建新的细胞注释。
- 分析感兴趣细胞群之间的差异表达。在表格中过滤感兴趣基因,并在火山图中查看结果
- 生成新的降维坐标
- 支持全转录组或靶向RNA表达数据、AbSeq/CITE-seq蛋白质表达计数以及样本复用数据
系统要求:
- Windows 10或更高版本(64位)
- MacOS 11(Big Sur)或更高版本
- Intel或Apple Silicon芯片
- 最低8 GB内存
- 处理20万个细胞需16 GB内存
- 处理100万个细胞需64 GB内存
"Cellismo is an excellent, lightweight bioinformatics tool for BD Rhapsody users, running on Windows and macOS. You can easily check sample quality, set analysis cutoffs, and view differentially expressed genes across clusters and samples. A key feature is using ribosomal RNA expression for deeper cell quality checks. For Abseq using BD’s antibodies, Cellismo lets you separate protein and mRNA expression with ease, making single-cell analysis straightforward and user-friendly."

"Cellismo is an excellent, lightweight bioinformatics tool for BD Rhapsody users, running on Windows and macOS. You can easily check sample quality, set analysis cutoffs, and view differentially expressed genes across clusters and samples. A key feature is using ribosomal RNA expression for deeper cell quality checks. For Abseq using BD’s antibodies, Cellismo lets you separate protein and mRNA expression with ease, making single-cell analysis straightforward and user-friendly."
"Cellismo made analysis and visualization of Rhapsody data simple and intuitive. Both people experienced with R and people who have never used R quickly performed tasks that typically take many lines of code. It simplified the preprocessing and graphing processes, facilitating deeper exploration of our data in far less time. The lasso tool and interactive DEG output made comparing populations of interest much easier as well. Cellismo is exactly the software we were looking for to rapidly analyze our single cell data with a minimal learning curve."

"Cellismo made analysis and visualization of Rhapsody data simple and intuitive. Both people experienced with R and people who have never used R quickly performed tasks that typically take many lines of code. It simplified the preprocessing and graphing processes, facilitating deeper exploration of our data in far less time. The lasso tool and interactive DEG output made comparing populations of interest much easier as well. Cellismo is exactly the software we were looking for to rapidly analyze our single cell data with a minimal learning curve."
"Cellismo is a program that is easy to use for both beginners and advanced users to perform all adjustments they need to get the most out of their data. I especially liked the numerous customization options for all types of plots. Additionally, the interactive design of the graphs makes data discussions so much easier, as all information for each individual data point being displayed is immediately at hand. Paired with the top-notch customer support that BD provides, I believe Cellismo will be a great tool for data analysis for any user."

"Cellismo is a program that is easy to use for both beginners and advanced users to perform all adjustments they need to get the most out of their data. I especially liked the numerous customization options for all types of plots. Additionally, the interactive design of the graphs makes data discussions so much easier, as all information for each individual data point being displayed is immediately at hand. Paired with the top-notch customer support that BD provides, I believe Cellismo will be a great tool for data analysis for any user."
"As researchers, we constantly seek tools that improve accuracy and save time, and Cellismo excels in both areas. Its intuitive interface and advanced analysis tools have simplified workflows that once required extensive manual effort. With Cellismo, we can visualize and interpret complex data with exceptional precision, allowing us to derive insights faster and more effectively. We are excited to continue exploring its capabilities as we push the boundaries of cellular research."

"As researchers, we constantly seek tools that improve accuracy and save time, and Cellismo excels in both areas. Its intuitive interface and advanced analysis tools have simplified workflows that once required extensive manual effort. With Cellismo, we can visualize and interpret complex data with exceptional precision, allowing us to derive insights faster and more effectively. We are excited to continue exploring its capabilities as we push the boundaries of cellular research."
"I had a great time working through the new Cellismo software. I was quickly able to navigate through the program to see what I wanted to see from our data. This program not only gets me to where I want to go independently, I also am not interrupting the workflow of my lab every time I get an itch with a new idea. I had a really fun time looking at our data with this program. I very much appreciate that BD has come up with this simple and user-friendly data visualization software package for people like me to use (and I will use this)."

"I had a great time working through the new Cellismo software. I was quickly able to navigate through the program to see what I wanted to see from our data. This program not only gets me to where I want to go independently, I also am not interrupting the workflow of my lab every time I get an itch with a new idea. I had a really fun time looking at our data with this program. I very much appreciate that BD has come up with this simple and user-friendly data visualization software package for people like me to use (and I will use this)."
"Cellismo is an excellent, lightweight bioinformatics tool for BD Rhapsody users, running on Windows and macOS. You can easily check sample quality, set analysis cutoffs, and view differentially expressed genes across clusters and samples. A key feature is using ribosomal RNA expression for deeper cell quality checks. For Abseq using BD’s antibodies, Cellismo lets you separate protein and mRNA expression with ease, making single-cell analysis straightforward and user-friendly."

"Cellismo is an excellent, lightweight bioinformatics tool for BD Rhapsody users, running on Windows and macOS. You can easily check sample quality, set analysis cutoffs, and view differentially expressed genes across clusters and samples. A key feature is using ribosomal RNA expression for deeper cell quality checks. For Abseq using BD’s antibodies, Cellismo lets you separate protein and mRNA expression with ease, making single-cell analysis straightforward and user-friendly."
"Cellismo made analysis and visualization of Rhapsody data simple and intuitive. Both people experienced with R and people who have never used R quickly performed tasks that typically take many lines of code. It simplified the preprocessing and graphing processes, facilitating deeper exploration of our data in far less time. The lasso tool and interactive DEG output made comparing populations of interest much easier as well. Cellismo is exactly the software we were looking for to rapidly analyze our single cell data with a minimal learning curve."

"Cellismo made analysis and visualization of Rhapsody data simple and intuitive. Both people experienced with R and people who have never used R quickly performed tasks that typically take many lines of code. It simplified the preprocessing and graphing processes, facilitating deeper exploration of our data in far less time. The lasso tool and interactive DEG output made comparing populations of interest much easier as well. Cellismo is exactly the software we were looking for to rapidly analyze our single cell data with a minimal learning curve."
"Cellismo is a program that is easy to use for both beginners and advanced users to perform all adjustments they need to get the most out of their data. I especially liked the numerous customization options for all types of plots. Additionally, the interactive design of the graphs makes data discussions so much easier, as all information for each individual data point being displayed is immediately at hand. Paired with the top-notch customer support that BD provides, I believe Cellismo will be a great tool for data analysis for any user."

"Cellismo is a program that is easy to use for both beginners and advanced users to perform all adjustments they need to get the most out of their data. I especially liked the numerous customization options for all types of plots. Additionally, the interactive design of the graphs makes data discussions so much easier, as all information for each individual data point being displayed is immediately at hand. Paired with the top-notch customer support that BD provides, I believe Cellismo will be a great tool for data analysis for any user."
"As researchers, we constantly seek tools that improve accuracy and save time, and Cellismo excels in both areas. Its intuitive interface and advanced analysis tools have simplified workflows that once required extensive manual effort. With Cellismo, we can visualize and interpret complex data with exceptional precision, allowing us to derive insights faster and more effectively. We are excited to continue exploring its capabilities as we push the boundaries of cellular research."

"As researchers, we constantly seek tools that improve accuracy and save time, and Cellismo excels in both areas. Its intuitive interface and advanced analysis tools have simplified workflows that once required extensive manual effort. With Cellismo, we can visualize and interpret complex data with exceptional precision, allowing us to derive insights faster and more effectively. We are excited to continue exploring its capabilities as we push the boundaries of cellular research."
"I had a great time working through the new Cellismo software. I was quickly able to navigate through the program to see what I wanted to see from our data. This program not only gets me to where I want to go independently, I also am not interrupting the workflow of my lab every time I get an itch with a new idea. I had a really fun time looking at our data with this program. I very much appreciate that BD has come up with this simple and user-friendly data visualization software package for people like me to use (and I will use this)."

"I had a great time working through the new Cellismo software. I was quickly able to navigate through the program to see what I wanted to see from our data. This program not only gets me to where I want to go independently, I also am not interrupting the workflow of my lab every time I get an itch with a new idea. I had a really fun time looking at our data with this program. I very much appreciate that BD has come up with this simple and user-friendly data visualization software package for people like me to use (and I will use this)."
"Cellismo is an excellent, lightweight bioinformatics tool for BD Rhapsody users, running on Windows and macOS. You can easily check sample quality, set analysis cutoffs, and view differentially expressed genes across clusters and samples. A key feature is using ribosomal RNA expression for deeper cell quality checks. For Abseq using BD’s antibodies, Cellismo lets you separate protein and mRNA expression with ease, making single-cell analysis straightforward and user-friendly."

"Cellismo is an excellent, lightweight bioinformatics tool for BD Rhapsody users, running on Windows and macOS. You can easily check sample quality, set analysis cutoffs, and view differentially expressed genes across clusters and samples. A key feature is using ribosomal RNA expression for deeper cell quality checks. For Abseq using BD’s antibodies, Cellismo lets you separate protein and mRNA expression with ease, making single-cell analysis straightforward and user-friendly."


免费,但功能强大——立即体验
立即下载免费的BD Cellismo™ Data Visualization Tool。填写信息并点击提交后,系统将自动开始下载。我们将通过您提供的信息,为您推送产品的最新进展、更新和漏洞修复内容。
Windows用户:
文件下载完成后,双击.exe文件。安装过程中将显示进度动画。安装完成后程序将自动启动,并在桌面创建快捷方式。
Mac用户:
提供两种不同的安装包,您可根据您的芯片类型进行选择-Mac(Intel)或Mac(Apple M)。您可以通过以下步骤查看您的芯片类型:点击左上角的“Apple”菜单。 选择“关于本机”,在“芯片”一栏中,将显示“Intel”或“Apple”。在下面的表格中,选择适合您的系统的选项。文件下载完成后,双击.zip文件以解压出Cellismo.app。双击Cellismo.app打开。您可以将应用程序移动到您选择的文件夹中(例如,用户的“应用程序”目录)。

了解该工具中可用于数据探索的七种图形类型。使用t-SNE和UMAP进行降维。可通过调整点大小、不透明度和调色板来自定义图形。将绘图保存为SVG或PNG格式,或添加到图库中。在分析结束时,将所有图形导出为PNG格式。
- Chapters
- descriptions off, selected
- subtitles settings, opens subtitles settings dialog
- subtitles off, selected
This is a modal window.
Beginning of dialog window. Escape will cancel and close the window.
End of dialog window.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
了解如何使用BD Cellismo™ Tool在单细胞分析中执行质量控制。可调整滑动条来设置元数据,如线粒体百分比、每个细胞的分子数及每个细胞的生物产物数等。设置阈值,标记不需要的细胞,并应用筛选器以优化数据集。
- Chapters
- descriptions off, selected
- subtitles settings, opens subtitles settings dialog
- subtitles off, selected
- en (Main), selected
This is a modal window.
Beginning of dialog window. Escape will cancel and close the window.
End of dialog window.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
探索BD Cellismo™ Tool的细胞类型标注功能。使用内置的CellTypist算法及人类和小鼠参考数据集。将标注结果导出为CSV文件,用于下游分析。支持基于蛋白、RNA或组合模式创建新的聚类。
- Chapters
- descriptions off, selected
- subtitles settings, opens subtitles settings dialog
- subtitles off, selected
- en (Main), selected
This is a modal window.
Beginning of dialog window. Escape will cancel and close the window.
End of dialog window.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
了解如何使用该工具执行差异表达分析。可分析蛋白或RNA模式,选择感兴趣的细胞,并在交互式火山图中查看结果。可调整显著性水平,突出显示基因,并在降维图上探索表达情况。
- Chapters
- descriptions off, selected
- subtitles settings, opens subtitles settings dialog
- subtitles off, selected
- en (Main), selected
This is a modal window.
Beginning of dialog window. Escape will cancel and close the window.
End of dialog window.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
为基因或蛋白构建生物产物集,包括针对PBMC细胞类型的默认集合。在热图中可视化CD45RA、CD4和CD3等标志物的联合表达。使用实用工具计算新的降维坐标。
- Chapters
- descriptions off, selected
- subtitles settings, opens subtitles settings dialog
- subtitles off, selected
This is a modal window.
Beginning of dialog window. Escape will cancel and close the window.
End of dialog window.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
- Chapters
- descriptions off, selected
- subtitles settings, opens subtitles settings dialog
- subtitles off, selected
- en (Main), selected
This is a modal window.
Beginning of dialog window. Escape will cancel and close the window.
End of dialog window.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
- Chapters
- descriptions off, selected
- subtitles settings, opens subtitles settings dialog
- subtitles off, selected
- en (Main), selected
This is a modal window.
Beginning of dialog window. Escape will cancel and close the window.
End of dialog window.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
- Chapters
- descriptions off, selected
- subtitles settings, opens subtitles settings dialog
- subtitles off, selected
- en (Main), selected
This is a modal window.
Beginning of dialog window. Escape will cancel and close the window.
End of dialog window.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
This is a modal window. This modal can be closed by pressing the Escape key or activating the close button.
下载免费的BD Cellismo™工具
填写您的信息并点击“提交”按钮后,将自动开始下载。
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仅供研究使用。不用于诊断或治疗程序。
Apple和Mac是Apple, Inc.的商标。Illumina是Illumina, Inc.的商标。Intel是Intel Corporation或其子公司的商标。