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概述
SeqGeq™ v1.7软件是一个桌面生物信息学平台,用于单细胞实验分析,由FlowJo™ 软件的制造商开发。SeqGeq™ 软件包括一系列信息功能,包括:V(D)J分析,Seurat聚类,单细胞轨迹分析等等。
使用SeqGeq™软件支持研究人员进行复杂分析、数据探索和可视化,具有易于使用的拖放界面,界面与 FlowJo™软件相似。SeqGeq™ 软件可以生成高质量的数据,这些数据可以很容易地共享。


FEATURES
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SeqGeq™ Software has an intuitive drag-and-drop interface and lets you:

- Easily import your scRNA-seq data from any platform
- Perform dimensionality reduction with tSNE, PCA and LDA
- Select populations of interest using intuitive gating tools
- Identify, compare and contrast differentially expressed genes
- Generate publication-ready figures using powerful visualization tools
Powerful tools help you dive deep into single-cell gene expression

- Differential expression analysis in volcano plots allows statistically rigorous exploration of up- and downregulated genes
- Gene set enrichment analysis—to define biological function and identify target genes of interest
- Quality control, which creates QC parameters used to remove outliers, debris and doublets
- More tools including those with which to map developmental trajectory, handle dropouts and categorical variables, and many more available as plugins on the FlowJo Exchange
Open-ended plugin architecture helps your research stay ahead of the curve.

SeqGeq™ Software offers plugins that help bring informatics innovation to you quickly and intuitively. Current offerings include but are not limited to:
- Seurat
- ViolinBox
- BatchLR
- TriMap
- iCellR
Download and see the complete library of plugins available on the FlowJo Exchange!

特点
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开放式插件架构可以帮助您的研究保持领先。


SeqGeq™ 软件提供插件,帮助您快速直观地学习信息学方法。目前的产品包括但不限于:
- Seurat插件
- ViolinBox插件
- BatchLR插件
- TriMap插件
- iCellR插件
下载并查看FlowJo Exchange 网站上提供的完整插件库!

新的升级
SeqGeq v1.7 软件的最新版本
- 此更新包含几项工作流程的改进,以精简您的分析。
- “Save”功能的问题已得到修复。不再需要使用” Save AS”功能并制作连续版本或保存过多的.geqzip分析文件副本,更改为关闭工作区时会创建的自动保存对话框。
- 更新为Java9 运行
- Layouts中的单细胞热图的数据现已缓存,更新初始创建的热图速度会更快。